More options    Example    Help                                                                                      Download cWords here

cWords is a method used for identification of over-represented words in a set of ranked sequences. By default it is aimed at human miRNA analysis; you give a ranked list of differential expression values of genes across two conditions and it finds words in 3'UTRs of lengths 6 and 7 over-represented in the most regulated genes.

Your sequences (Optional):
Word Lengths: (max. 9)
Order of background model
Choose annotations
Custom Annotation File:
Sense annotation?
Use internal integer IDs (optional)

With no jobs queued a default analysis takes around 5-10 minutes.

Email notification (when done):