This web site is a companion to the paper "MicroRNA transfection and AGO-bound CLIP-seq datasets reveal distinct determinants of miRNA action" and provides predictions for miRNA targets for human and mouse using the two predictive models described in the paper: a model trained from microarry studies following transfection, and a model trained from PAR-CLIP datasets. Select "browse" above to see these prediction tracks in the UCSC genome browser.
MicroRNA transfection and AGO-bound CLIP-seq datasets reveal distinct determinants of miRNA action. RNA, 2011 (in press)
Jiayu Wen, Brian J. Parker, Anders Jacobsen, Anders Krogh
The Bioinformatics Centre, Department of Biology, University of Copenhagen, Ole Maaloes Vej 5, 2200 Copenhagen N, Denmark
Email: jeanwen@binf.ku.dk or krogh@binf.ku.dk